RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g47630.1 View Network Show in Genome Browser |
| Other Names | Os05g0549600 |
| Description | peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 27287037-27289877 Nucleotide Length: 801 |
| Protein-coding | LOC_Os05g47630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g18750 LOC_Os01g41030 LOC_Os03g41612 LOC_Os02g03540 LOC_Os03g56840 LOC_Os01g52530 LOC_Os01g58790 LOC_Os02g48390 LOC_Os05g44390 LOC_Os02g24134 LOC_Os04g14654 More.. |
| Downstream Genes | LOC_Os06g41360 LOC_Os08g09940 LOC_Os11g32880 LOC_Os10g27230 LOC_Os09g24990 LOC_Os06g01290 LOC_Os08g34170 LOC_Os06g45820 LOC_Os12g28460 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g47630.1 |
| Rice Genome Annotation | LOC_Os05g47630.1 |
| Ricechip | LOC_Os05g47630.1 |
| KEGG | osa:4339520 dosa:Os05t0549600-01 |
| Entrez-Gene | 4339520 |