RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g47770.1 View Network Show in Genome Browser |
| Other Names | Os05g0550800 |
| Description | serine/threonine-protein kinase At1g18390 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 27360906-27367545 Nucleotide Length: 2055 |
| Protein-coding | LOC_Os05g47770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g58580 LOC_Os02g49800 LOC_Os05g34270 LOC_Os04g58090 LOC_Os03g57310 LOC_Os04g12580 LOC_Os04g37904 LOC_Os02g55560 LOC_Os01g74200 LOC_Os04g12560 LOC_Os02g38230 More.. |
| Downstream Genes | LOC_Os10g02970 LOC_Os05g48930 LOC_Os06g18000 LOC_Os07g32380 LOC_Os06g48300 LOC_Os06g33549 LOC_Os09g37600 LOC_Os06g33530 LOC_Os12g04220 LOC_Os07g46690 LOC_Os11g04460 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g47770.1 |
| Rice Genome Annotation | LOC_Os05g47770.1 |
| Ricechip | LOC_Os05g47770.1 |
| KEGG | osa:4339529 dosa:Os05t0550800-01 |
| Entrez-Gene | 4339529 |