RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g47820.1 View Network Show in Genome Browser |
| Other Names | Os05g0551500 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 27413101-27414368 Nucleotide Length: 633 |
| Protein-coding | LOC_Os05g47820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g36680 LOC_Os03g45210 LOC_Os02g12310 LOC_Os01g74590 LOC_Os02g15090 LOC_Os01g44220 LOC_Os02g25640 LOC_Os05g26400 LOC_Os05g26386 LOC_Os05g26377 LOC_Os05g26368 More.. |
| Downstream Genes | LOC_Os06g51084 LOC_Os07g42390 LOC_Os07g11630 LOC_Os07g11380 LOC_Os07g11360 LOC_Os11g31330 LOC_Os12g42670 LOC_Os07g12080 LOC_Os05g49930 LOC_Os09g22410 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g47820.1 |
| Rice Genome Annotation | LOC_Os05g47820.1 |
| Ricechip | LOC_Os05g47820.1 |
| KEGG | osa:4339533 dosa:Os05t0551500-01 |
| Entrez-Gene | 4339533 |