RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g47850.1 View Network Show in Genome Browser |
| Other Names | Os05g0551900 |
| Description | chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 27440760-27445952 Nucleotide Length: 2397 |
| Protein-coding | LOC_Os05g47850 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g08480 LOC_Os03g61030 LOC_Os03g53710 LOC_Os04g58840 LOC_Os02g43600 LOC_Os03g08790 LOC_Os04g46010 LOC_Os01g48690 LOC_Os03g55970 LOC_Os03g55930 LOC_Os03g15870 More.. |
| Downstream Genes | LOC_Os10g36860 LOC_Os06g20320 LOC_Os08g25900 LOC_Os08g14450 LOC_Os08g02060 LOC_Os06g01490 LOC_Os09g07350 LOC_Os08g23180 LOC_Os06g48600 LOC_Os06g04150 LOC_Os06g43900 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g47850.1 |
| Rice Genome Annotation | LOC_Os05g47850.1 |
| Ricechip | LOC_Os05g47850.1 |
| KEGG | osa:4339536 dosa:Os05t0551900-00 |
| Entrez-Gene | 4339536 |