RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g47930.2 View Network Show in Genome Browser |
| Other Names | Os05g0552500 |
| Description | OsQSOXL1 quiescin-sulfhydryl oxidase-like OsQSOXL1, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 27474045-27479064 Nucleotide Length: 1557 |
| Protein-coding | LOC_Os05g47930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g07376 LOC_Os04g44830 LOC_Os04g57930 LOC_Os04g35290 LOC_Os03g55820 LOC_Os02g53400 LOC_Os01g73234 LOC_Os01g68480 LOC_Os04g53740 LOC_Os02g35900 LOC_Os03g10850 More.. |
| Downstream Genes | LOC_Os07g08840 LOC_Os08g29110 LOC_Os09g23650 LOC_Os06g45510 LOC_Os10g34380 LOC_Os07g09310 LOC_Os08g45160 LOC_Os12g08730 LOC_Os06g47350 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5144-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g47930.2 |
| Rice Genome Annotation | LOC_Os05g47930.2 |
| Ricechip | LOC_Os05g47930.2 |
| KEGG | osa:4339541 dosa:Os05t0552500-02 |
| Entrez-Gene | 4339541 |