RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g47960.1 View Network Show in Genome Browser |
| Other Names | Os05g0552800 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 27498769-27499586 Nucleotide Length: 528 |
| Protein-coding | LOC_Os05g47960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g42730 LOC_Os01g46080 LOC_Os02g31140 LOC_Os05g01940 LOC_Os01g36970 |
| Downstream Genes | LOC_Os09g34860 LOC_Os11g45400 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g47960.1 |
| Rice Genome Annotation | LOC_Os05g47960.1 |
| Ricechip | LOC_Os05g47960.1 |
| KEGG | osa:4339544 dosa:Os05t0552800-01 |
| Entrez-Gene | 4339544 |