RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g48160.3 View Network Show in Genome Browser |
| Other Names | Os05g0555300 |
| Description | 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 27605931-27607548 Nucleotide Length: 558 |
| Protein-coding | LOC_Os05g48160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g48040 LOC_Os03g45710 LOC_Os03g61960 LOC_Os03g57690 LOC_Os03g50540 LOC_Os03g57680 LOC_Os02g29510 LOC_Os03g31550 |
| Downstream Genes | LOC_Os09g33950 LOC_Os07g01930 LOC_Os09g20440 LOC_Os07g18120 LOC_Os10g04860 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g48160.3 |
| Rice Genome Annotation | LOC_Os05g48160.3 |
| Ricechip | LOC_Os05g48160.3 |
| KEGG | osa:4339560 dosa:Os05t0555300-01 |
| Entrez-Gene | 4339560 |