RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g48200.1 View Network Show in Genome Browser |
| Other Names | Os05g0555600 |
| Description | glutamate synthase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 27622654-27636451 Nucleotide Length: 6567 |
| Protein-coding | LOC_Os05g48200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0040007 | growth | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g48960 LOC_Os04g54800 LOC_Os02g51410 LOC_Os02g55720 LOC_Os02g57180 |
| Downstream Genes | LOC_Os07g46460 LOC_Os06g12150 LOC_Os09g36800 LOC_Os10g34020 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00250 rn00910 rn01100 rn01110 rn01120 rn01210 |
| Metacyc Pathways | PWY-3282 GLUGLNSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g48200.1 |
| Rice Genome Annotation | LOC_Os05g48200.1 |
| Ricechip | LOC_Os05g48200.1 |
| KEGG | osa:4339561 dosa:Os05t0555600-01 |
| Entrez-Gene | 4339561 |