RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os05g48220.1 View Network Show in Genome Browser |
Other Names | Os05g0555900,Os05g0555800 |
Description | 60S ribosomal protein L35a-3, putative, expressed |
Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 27640670-27641646 Nucleotide Length: 336 |
Protein-coding | LOC_Os05g48220 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0006412 | translation | Biological Process | IEA | |
GO:0006412 | translation | Biological Process | IEA | |
GO:0005198 | structural molecule activity | Molecular Function | IEA | |
GO:0005198 | structural molecule activity | Molecular Function | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0016020 | membrane | Cellular Component | IEA | |
GO:0016020 | membrane | Cellular Component | IEA | |
GO:0005840 | ribosome | Cellular Component | IEA | |
GO:0005840 | ribosome | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os02g27760 LOC_Os02g40880 LOC_Os02g14059 LOC_Os05g28750 LOC_Os01g19840 LOC_Os05g11710 LOC_Os01g10820 LOC_Os05g30530 LOC_Os03g31090 LOC_Os04g35090 LOC_Os02g34460 More.. |
Downstream Genes | LOC_Os07g10720 LOC_Os08g02400 LOC_Os08g02410 LOC_Os06g35730 LOC_Os12g05430 LOC_Os09g24690 LOC_Os08g06040 LOC_Os09g31180 LOC_Os08g33920 LOC_Os10g27190 LOC_Os12g03090 More.. |
Database Links | |
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Gramene | LOC_Os05g48220.1 |
Rice Genome Annotation | LOC_Os05g48220.1 |
Ricechip | LOC_Os05g48220.1 |
KEGG | dosa:Os05t0555800-00 |
Entrez-Gene | 9271790 |