RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g48320.1 View Network Show in Genome Browser |
| Other Names | Os05g0557000 |
| Description | 60S ribosomal protein L37a, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 27699743-27701860 Nucleotide Length: 279 |
| Protein-coding | LOC_Os05g48320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g28750 LOC_Os01g19840 LOC_Os02g02130 LOC_Os02g56990 LOC_Os02g30050 LOC_Os03g46490 LOC_Os05g39960 LOC_Os04g39700 LOC_Os03g13170 LOC_Os05g48310 LOC_Os03g21940 More.. |
| Downstream Genes | LOC_Os08g03450 LOC_Os09g39500 LOC_Os11g03400 LOC_Os12g03090 LOC_Os11g41610 LOC_Os10g27190 LOC_Os11g24610 LOC_Os08g02340 LOC_Os07g08330 LOC_Os08g10608 LOC_Os07g08660 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g48320.1 |
| Rice Genome Annotation | LOC_Os05g48320.1 |
| Ricechip | LOC_Os05g48320.1 |
| KEGG | osa:4339573 dosa:Os05t0557000-01 |
| Entrez-Gene | 4339573 |