RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g48360.1 View Network Show in Genome Browser |
| Other Names | Os05g0557400 |
| Description | membrane attack complex component/perforin/complement C9, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 27723402-27727479 Nucleotide Length: 1887 |
| Protein-coding | LOC_Os05g48360 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g57310 LOC_Os02g41510 LOC_Os01g38980 LOC_Os01g08670 LOC_Os01g54510 LOC_Os02g21040 |
| Downstream Genes | LOC_Os09g37080 LOC_Os05g51230 LOC_Os07g40630 LOC_Os10g28160 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g48360.1 |
| Rice Genome Annotation | LOC_Os05g48360.1 |
| Ricechip | LOC_Os05g48360.1 |
| KEGG | osa:4339576 dosa:Os05t0557400-01 |
| Entrez-Gene | 4339576 |