RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g48410.1 View Network Show in Genome Browser |
| Other Names | Os05g0557800 |
| Description | 50S ribosomal protein L21, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 27756066-27759135 Nucleotide Length: 753 |
| Protein-coding | LOC_Os05g48410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g25540 LOC_Os01g69950 LOC_Os03g58540 LOC_Os05g28940 LOC_Os01g55890 LOC_Os04g56210 LOC_Os04g56230 LOC_Os01g62900 LOC_Os05g38150 LOC_Os03g27450 LOC_Os02g04660 More.. |
| Downstream Genes | LOC_Os08g31228 LOC_Os08g31219 LOC_Os07g47300 LOC_Os11g47800 LOC_Os08g06230 LOC_Os07g43470 LOC_Os12g17320 LOC_Os05g50550 LOC_Os06g46450 LOC_Os12g13824 LOC_Os08g09350 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g48410.1 |
| Rice Genome Annotation | LOC_Os05g48410.1 |
| Ricechip | LOC_Os05g48410.1 |
| KEGG | osa:4339580 dosa:Os05t0557800-02 |
| Entrez-Gene | 4339580 |