RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g48450.3 View Network Show in Genome Browser |
| Other Names | Os05g0558400 |
| Description | aminotransferase domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 27778787-27784832 Nucleotide Length: 1230 |
| Protein-coding | LOC_Os05g48450 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g50510 LOC_Os02g10640 LOC_Os04g56646 LOC_Os03g01600 LOC_Os04g52900 LOC_Os02g17330 LOC_Os02g15360 LOC_Os01g57570 LOC_Os04g47190 LOC_Os01g22520 LOC_Os03g12890 More.. |
| Downstream Genes | LOC_Os06g25439 LOC_Os10g40200 LOC_Os06g12580 LOC_Os06g40560 LOC_Os08g04460 LOC_Os12g08260 LOC_Os07g07470 LOC_Os07g33240 LOC_Os06g09290 LOC_Os12g40780 LOC_Os10g32550 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g48450.3 |
| Rice Genome Annotation | LOC_Os05g48450.3 |
| Ricechip | LOC_Os05g48450.3 |
| KEGG | osa:4339583 dosa:Os05t0558400-01 |
| Entrez-Gene | 4339583 |