RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g48600.2 View Network Show in Genome Browser |
| Other Names | Os05g0559600 |
| Description | glycosyltransferase family 43 protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 27860628-27865038 Nucleotide Length: 1239 |
| Protein-coding | LOC_Os05g48600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g40030 LOC_Os03g16980 LOC_Os01g21320 LOC_Os01g62020 LOC_Os05g29990 LOC_Os03g17230 |
| Downstream Genes | LOC_Os07g47700 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g48600.2 |
| Rice Genome Annotation | LOC_Os05g48600.2 |
| Ricechip | LOC_Os05g48600.2 |
| KEGG | osa:4339589 dosa:Os05t0559600-01 |
| Entrez-Gene | 4339589 |