RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g48640.1 View Network Show in Genome Browser |
| Other Names | Os05g0560100 |
| Description | ATROPGEF7/ROPGEF7, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 27880009-27882932 Nucleotide Length: 1710 |
| Protein-coding | LOC_Os05g48640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g58730 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g48640.1 |
| Rice Genome Annotation | LOC_Os05g48640.1 |
| Ricechip | LOC_Os05g48640.1 |
| KEGG | osa:4339594 dosa:Os05t0560100-01 |
| Entrez-Gene | 4339594 |