RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g48670.1 View Network Show in Genome Browser |
| Other Names | Os05g0560400 |
| Description | OsFBT10 - F-box and tubby domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 27892622-27895816 Nucleotide Length: 1197 |
| Protein-coding | LOC_Os05g48670 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g56810 LOC_Os02g07060 LOC_Os03g01530 LOC_Os01g59150 LOC_Os01g18050 LOC_Os05g34170 LOC_Os03g45920 |
| Downstream Genes | LOC_Os06g46000 LOC_Os12g06670 LOC_Os09g32976 LOC_Os08g23710 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g48670.1 |
| Rice Genome Annotation | LOC_Os05g48670.1 |
| Ricechip | LOC_Os05g48670.1 |
| KEGG | osa:4339597 dosa:Os05t0560400-00 |
| Entrez-Gene | 4339597 |