RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g48850.1 View Network Show in Genome Browser |
| Other Names | Os05g0563000 |
| Description | no apical meristem protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 28003165-28005001 Nucleotide Length: 945 |
| Protein-coding | LOC_Os05g48850 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g48130 LOC_Os01g54620 LOC_Os05g03174 LOC_Os02g15230 LOC_Os03g52630 LOC_Os03g59210 LOC_Os03g64320 LOC_Os05g32110 |
| Downstream Genes | LOC_Os09g25490 LOC_Os09g36350 LOC_Os06g38960 LOC_Os12g01560 LOC_Os11g01570 LOC_Os12g23280 LOC_Os08g38170 LOC_Os06g44620 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g48850.1 |
| Rice Genome Annotation | LOC_Os05g48850.1 |
| Ricechip | LOC_Os05g48850.1 |
| KEGG | osa:4339612 dosa:Os05t0563000-01 |
| Entrez-Gene | 4339612 |