RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g48980.1 View Network Show in Genome Browser |
| Other Names | Os05g0564400 |
| Description | ras-related protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 28092825-28094580 Nucleotide Length: 654 |
| Protein-coding | LOC_Os05g48980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g12730 LOC_Os05g44050 LOC_Os01g37800 LOC_Os05g23860 LOC_Os05g34540 LOC_Os03g09140 LOC_Os03g59590 LOC_Os03g16900 LOC_Os05g44070 LOC_Os04g58180 LOC_Os01g54590 More.. |
| Downstream Genes | LOC_Os07g43170 LOC_Os07g16970 LOC_Os06g35814 LOC_Os08g42000 LOC_Os07g09680 LOC_Os07g31370 LOC_Os07g41180 LOC_Os07g33850 LOC_Os12g07874 LOC_Os06g21340 LOC_Os10g31864 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g48980.1 |
| Rice Genome Annotation | LOC_Os05g48980.1 |
| Ricechip | LOC_Os05g48980.1 |
| KEGG | osa:4339623 dosa:Os05t0564400-02 |
| Entrez-Gene | 4339623 |