RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g49070.1 View Network Show in Genome Browser |
| Other Names | Os05g0565500 |
| Description | dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 28131776-28133217 Nucleotide Length: 939 |
| Protein-coding | LOC_Os05g49070 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g01760 |
| Downstream Genes | LOC_Os06g02144 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00280 rn01100 rn00030 rn00480 rn01110 rn01120 |
| Metacyc Pathways | VALDEG-PWY OXIDATIVEPENT-PWY RUMP-PWY P122-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g49070.1 |
| Rice Genome Annotation | LOC_Os05g49070.1 |
| Ricechip | LOC_Os05g49070.1 |
| KEGG | osa:4339630 dosa:Os05t0565500-01 |
| Entrez-Gene | 4339630 |