RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g49120.1 View Network Show in Genome Browser |
| Other Names | Os05g0566200 |
| Description | NLI interacting factor-like phosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 28176577-28182471 Nucleotide Length: 1293 |
| Protein-coding | LOC_Os05g49120 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g32430 LOC_Os03g63300 |
| Downstream Genes | LOC_Os08g36420 LOC_Os07g10690 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g49120.1 |
| Rice Genome Annotation | LOC_Os05g49120.1 |
| Ricechip | LOC_Os05g49120.1 |
| KEGG | osa:4339631 dosa:Os05t0566200-01 |
| Entrez-Gene | 4339631 |