RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os05g49170.1 View Network Show in Genome Browser
Other Names	Os05g0566800
Description	cold acclimation protein WCOR413, putative, expressed
Gene Attributes	Chromosome: Chr5 CDS Coordinates (5'-3'): 28213808-28216045 Nucleotide Length: 669
Protein-coding	LOC_Os05g49170

Gene Ontology Classification
GO	Name	Type	Code
GO:0007154	cell communication	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0009991	response to extracellular stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0003674	molecular_function	Molecular Function	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0009536	plastid	Cellular Component	IEA
GO:0009579	thylakoid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g44870 LOC_Os02g47650 LOC_Os02g48560 LOC_Os05g02060 LOC_Os04g48350 LOC_Os02g45450 LOC_Os04g15690 LOC_Os03g18870 LOC_Os01g53240 LOC_Os04g10380 LOC_Os02g27030 More..
Downstream Genes	LOC_Os06g12220 LOC_Os07g44180 LOC_Os09g37020 LOC_Os09g29460 LOC_Os07g43390 LOC_Os12g24580 LOC_Os07g40620 LOC_Os06g42850 LOC_Os06g30310 LOC_Os07g41600 LOC_Os07g48830 More..

miRNA Regulations
miRNAs	osa-miR5817

Database Links
Gramene	LOC_Os05g49170.1
Rice Genome Annotation	LOC_Os05g49170.1
Ricechip	LOC_Os05g49170.1
KEGG	osa:4339637 dosa:Os05t0566800-01
Entrez-Gene	4339637