RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g49220.1 View Network Show in Genome Browser |
| Other Names | Os05g0567300 |
| Description | GTP-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 28242004-28244772 Nucleotide Length: 918 |
| Protein-coding | LOC_Os05g49220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g43050 LOC_Os01g68120 LOC_Os05g18850 LOC_Os03g38740 LOC_Os03g55640 LOC_Os03g02970 LOC_Os05g24160 LOC_Os05g35540 LOC_Os01g27730 LOC_Os03g51840 LOC_Os02g06300 More.. |
| Downstream Genes | LOC_Os09g14610 LOC_Os10g34430 LOC_Os06g25250 LOC_Os09g28000 LOC_Os11g02450 LOC_Os12g01916 LOC_Os11g05552 LOC_Os11g38020 LOC_Os09g33460 LOC_Os11g34210 LOC_Os11g47800 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g49220.1 |
| Rice Genome Annotation | LOC_Os05g49220.1 |
| Ricechip | LOC_Os05g49220.1 |
| KEGG | osa:9271571 dosa:Os05t0567300-01 |
| Entrez-Gene | 9271571 |