RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g49280.1 View Network Show in Genome Browser |
| Other Names | Os05g0567900 |
| Description | GATA zinc finger domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 28271822-28272850 Nucleotide Length: 753 |
| Protein-coding | LOC_Os05g49280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g70380 LOC_Os04g20270 LOC_Os01g70370 LOC_Os01g53450 LOC_Os04g37680 LOC_Os02g35940 LOC_Os01g70360 |
| Downstream Genes | LOC_Os10g31440 LOC_Os10g31420 LOC_Os06g10870 LOC_Os06g09870 LOC_Os09g28630 LOC_Os09g28620 LOC_Os10g41150 LOC_Os09g28650 LOC_Os09g28640 LOC_Os09g28660 LOC_Os11g31640 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g49280.1 |
| Rice Genome Annotation | LOC_Os05g49280.1 |
| Ricechip | LOC_Os05g49280.1 |
| KEGG | dosa:Os05t0567900-00 |