RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g49320.1 View Network Show in Genome Browser |
| Other Names | Os05g0568300 |
| Description | ribosomal protein L7/L12 C-terminal domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 28299340-28300084 Nucleotide Length: 540 |
| Protein-coding | LOC_Os05g49320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g17580 LOC_Os05g32220 LOC_Os05g22830 LOC_Os01g64090 LOC_Os02g24614 LOC_Os02g21660 LOC_Os03g03020 LOC_Os05g22860 LOC_Os03g61030 LOC_Os04g16820 LOC_Os02g47140 More.. |
| Downstream Genes | LOC_Os06g35470 LOC_Os08g44450 LOC_Os08g44380 LOC_Os10g32870 LOC_Os12g01710 LOC_Os10g35290 LOC_Os08g07480 LOC_Os11g29190 LOC_Os12g33240 LOC_Os06g34780 LOC_Os09g19954 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g49320.1 |
| Rice Genome Annotation | LOC_Os05g49320.1 |
| Ricechip | LOC_Os05g49320.1 |
| KEGG | osa:4339648 dosa:Os05t0568300-00 |
| Entrez-Gene | 4339648 |