RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g49410.1 View Network Show in Genome Browser |
| Other Names | Os05g0569200 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 28329371-28330711 Nucleotide Length: 471 |
| Protein-coding | LOC_Os05g49410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g27140 LOC_Os03g15870 LOC_Os05g01110 LOC_Os03g22780 LOC_Os01g59060 LOC_Os02g08380 LOC_Os02g30420 |
| Downstream Genes | LOC_Os12g35330 LOC_Os12g34890 LOC_Os09g30100 LOC_Os06g21530 LOC_Os12g35340 LOC_Os11g10990 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g49410.1 |
| Rice Genome Annotation | LOC_Os05g49410.1 |
| Ricechip | LOC_Os05g49410.1 |
| KEGG | osa:4339652 dosa:Os05t0569200-01 |
| Entrez-Gene | 4339652 |