RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g49430.1 View Network Show in Genome Browser |
| Other Names | Os05g0569400 |
| Description | aldose 1-epimerase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 28342175-28345123 Nucleotide Length: 960 |
| Protein-coding | LOC_Os05g49430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0030246 | carbohydrate binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g38530 LOC_Os03g26430 LOC_Os01g13150 LOC_Os04g56290 LOC_Os02g07490 LOC_Os04g40950 LOC_Os02g38920 LOC_Os02g47850 LOC_Os03g55640 |
| Downstream Genes | LOC_Os05g51670 LOC_Os08g28730 LOC_Os09g15420 LOC_Os08g03290 LOC_Os06g07960 LOC_Os06g07860 LOC_Os06g45590 LOC_Os09g35800 LOC_Os06g27760 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g49430.1 |
| Rice Genome Annotation | LOC_Os05g49430.1 |
| Ricechip | LOC_Os05g49430.1 |
| KEGG | osa:4339654 dosa:Os05t0569400-01 |
| Entrez-Gene | 4339654 |