RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g49590.2 View Network Show in Genome Browser |
| Other Names | Os05g0571000 |
| Description | suppressor of phythchrome A, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 28444997-28452931 Nucleotide Length: 3435 |
| Protein-coding | LOC_Os05g49590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g67320 LOC_Os01g33784 LOC_Os02g56880 |
| Downstream Genes | LOC_Os12g06810 LOC_Os06g35530 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g49590.2 |
| Rice Genome Annotation | LOC_Os05g49590.2 |
| Ricechip | LOC_Os05g49590.2 |
| KEGG | osa:4339663 dosa:Os05t0571000-01 |
| Entrez-Gene | 4339663 |