RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g49610.1 View Network Show in Genome Browser |
| Other Names | Os05g0571100 |
| Description | ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 28464100-28466023 Nucleotide Length: 1530 |
| Protein-coding | LOC_Os05g49610 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59510 LOC_Os01g59980 LOC_Os01g48300 LOC_Os03g20640 LOC_Os05g49220 LOC_Os02g02390 LOC_Os05g32680 LOC_Os01g61320 LOC_Os01g03660 |
| Downstream Genes | LOC_Os10g28600 LOC_Os11g32880 LOC_Os08g04450 LOC_Os11g41910 LOC_Os11g02450 LOC_Os10g12354 LOC_Os06g39906 LOC_Os06g13650 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g49610.1 |
| Rice Genome Annotation | LOC_Os05g49610.1 |
| Ricechip | LOC_Os05g49610.1 |
| KEGG | osa:4339664 dosa:Os05t0571100-01 |
| Entrez-Gene | 4339664 |