RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g49740.1 View Network Show in Genome Browser |
| Other Names | Os05g0572900 |
| Description | EMB2744, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 28534151-28536925 Nucleotide Length: 2064 |
| Protein-coding | LOC_Os05g49740 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g23260 LOC_Os03g56580 LOC_Os01g28450 LOC_Os01g74200 LOC_Os01g58730 LOC_Os03g05520 LOC_Os01g57610 LOC_Os02g38230 LOC_Os02g44510 LOC_Os03g01180 LOC_Os04g58090 More.. |
| Downstream Genes | LOC_Os09g19734 LOC_Os09g16510 LOC_Os07g12890 LOC_Os09g04339 LOC_Os08g17680 LOC_Os09g27830 LOC_Os06g16260 LOC_Os07g35580 LOC_Os06g05740 LOC_Os11g37920 LOC_Os07g08430 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g49740.1 |
| Rice Genome Annotation | LOC_Os05g49740.1 |
| Ricechip | LOC_Os05g49740.1 |
| KEGG | osa:4339672 dosa:Os05t0572900-01 |
| Entrez-Gene | 4339672 |