RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g49880.2 View Network Show in Genome Browser |
| Other Names | Os05g0574400 |
| Description | lactate/malate dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 28617595-28621585 Nucleotide Length: 696 |
| Protein-coding | LOC_Os05g49880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g10070 LOC_Os03g21950 LOC_Os03g50540 LOC_Os03g18420 LOC_Os04g24520 LOC_Os05g31290 LOC_Os03g56300 LOC_Os03g09210 LOC_Os02g57180 LOC_Os05g43360 LOC_Os02g14110 More.. |
| Downstream Genes | LOC_Os11g33240 LOC_Os06g50000 LOC_Os06g35540 LOC_Os10g33800 LOC_Os07g44650 LOC_Os10g42840 LOC_Os07g45090 LOC_Os07g39710 LOC_Os08g03640 LOC_Os08g09200 LOC_Os07g38970 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g49880.2 |
| Rice Genome Annotation | LOC_Os05g49880.2 |
| Ricechip | LOC_Os05g49880.2 |
| KEGG | osa:4339682 dosa:Os05t0574400-01 |
| Entrez-Gene | 4339682 |