RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g50080.1 View Network Show in Genome Browser |
| Other Names | Os05g0576300 |
| Description | zinc finger C-x8-C-x5-C-x3-H type family protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 28702233-28704507 Nucleotide Length: 1032 |
| Protein-coding | LOC_Os05g50080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g60110 LOC_Os05g40290 LOC_Os01g60260 LOC_Os01g66300 LOC_Os05g34670 LOC_Os01g45730 |
| Downstream Genes | LOC_Os07g12490 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g50080.1 |
| Rice Genome Annotation | LOC_Os05g50080.1 |
| Ricechip | LOC_Os05g50080.1 |
| KEGG | osa:4339693 dosa:Os05t0576300-01 |
| Entrez-Gene | 4339693 |