RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g50300.1 View Network Show in Genome Browser |
| Other Names | Os05g0579200 |
| Description | AMP-binding enzyme, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 28829948-28832131 Nucleotide Length: 1950 |
| Protein-coding | LOC_Os05g50300 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g58400 LOC_Os04g52460 LOC_Os05g43610 LOC_Os04g43300 LOC_Os01g59120 LOC_Os01g09790 LOC_Os05g27780 LOC_Os04g57440 LOC_Os02g54120 |
| Downstream Genes | LOC_Os08g31840 LOC_Os07g08500 LOC_Os11g44910 LOC_Os06g08740 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g50300.1 |
| Rice Genome Annotation | LOC_Os05g50300.1 |
| Ricechip | LOC_Os05g50300.1 |
| KEGG | osa:4339712 dosa:Os05t0579200-01 |
| Entrez-Gene | 4339712 |