RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g50480.1 View Network Show in Genome Browser |
| Other Names | Os05g0581800 |
| Description | protein of unknown function DUF1296 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 28940141-28948384 Nucleotide Length: 2589 |
| Protein-coding | LOC_Os05g50480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g38810 LOC_Os03g04460 LOC_Os02g12580 LOC_Os04g56980 |
| Downstream Genes | LOC_Os11g38900 LOC_Os11g34230 LOC_Os06g21580 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5144-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g50480.1 |
| Rice Genome Annotation | LOC_Os05g50480.1 |
| Ricechip | LOC_Os05g50480.1 |
| KEGG | osa:4339729 dosa:Os05t0581800-01 |
| Entrez-Gene | 4339729 |