RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g50490.1 View Network Show in Genome Browser |
| Other Names | Os05g0581900 |
| Description | X8 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 28950837-28952754 Nucleotide Length: 813 |
| Protein-coding | LOC_Os05g50490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g41550 LOC_Os04g37920 LOC_Os02g36380 LOC_Os04g58580 LOC_Os03g61100 LOC_Os02g12650 LOC_Os03g57430 LOC_Os03g10190 |
| Downstream Genes | LOC_Os06g25950 LOC_Os07g30150 LOC_Os09g19790 LOC_Os08g30810 LOC_Os10g29470 LOC_Os12g06890 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g50490.1 |
| Rice Genome Annotation | LOC_Os05g50490.1 |
| Ricechip | LOC_Os05g50490.1 |
| KEGG | osa:4339730 dosa:Os05t0581900-01 |
| Entrez-Gene | 4339730 |