RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g50570.1 View Network Show in Genome Browser |
| Other Names | Os05g0582500 |
| Description | OsSCP29 - Putative Serine Carboxypeptidase homologue, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 28995973-28997546 Nucleotide Length: 1341 |
| Protein-coding | LOC_Os05g50570 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g21990 LOC_Os04g47240 LOC_Os02g35010 LOC_Os02g44642 LOC_Os04g35700 |
| Downstream Genes | LOC_Os11g10100 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1436 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g50570.1 |
| Rice Genome Annotation | LOC_Os05g50570.1 |
| Ricechip | LOC_Os05g50570.1 |
| KEGG | osa:4339736 dosa:Os05t0582500-01 |
| Entrez-Gene | 4339736 |