RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g50750.1 View Network Show in Genome Browser |
| Other Names | Os05g0584600 |
| Description | AAA family ATPase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 29093548-29098856 Nucleotide Length: 2568 |
| Protein-coding | LOC_Os05g50750 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g49230 LOC_Os03g60750 LOC_Os03g25450 LOC_Os03g27450 LOC_Os04g39060 LOC_Os04g34130 |
| Downstream Genes | LOC_Os06g49140 LOC_Os09g27270 LOC_Os07g42632 LOC_Os10g36860 LOC_Os07g09720 LOC_Os09g34010 LOC_Os06g04610 LOC_Os07g44190 LOC_Os06g07896 LOC_Os11g38600 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00860 rn01100 rn01110 |
| Metacyc Pathways | CHLOROPHYLL-SYN |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g50750.1 |
| Rice Genome Annotation | LOC_Os05g50750.1 |
| Ricechip | LOC_Os05g50750.1 |
| KEGG | osa:4339748 dosa:Os05t0584600-02 |
| Entrez-Gene | 4339748 |