RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g50800.1 View Network Show in Genome Browser |
| Other Names | Os05g0585400 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 29137463-29140249 Nucleotide Length: 909 |
| Protein-coding | LOC_Os05g50800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g14610 LOC_Os01g67190 LOC_Os04g58130 LOC_Os01g51840 |
| Downstream Genes | LOC_Os07g30810 LOC_Os08g43320 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g50800.1 |
| Rice Genome Annotation | LOC_Os05g50800.1 |
| Ricechip | LOC_Os05g50800.1 |
| KEGG | osa:4339750 dosa:Os05t0585400-01 |
| Entrez-Gene | 4339750 |