RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g50840.1 View Network Show in Genome Browser |
| Other Names | Os05g0585900 |
| Description | mitochondrial carrier protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 29156327-29161668 Nucleotide Length: 1068 |
| Protein-coding | LOC_Os05g50840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g10740 LOC_Os05g23720 LOC_Os02g38020 LOC_Os02g48720 |
| Downstream Genes | LOC_Os11g40150 LOC_Os12g31370 LOC_Os06g40200 LOC_Os07g10830 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g50840.1 |
| Rice Genome Annotation | LOC_Os05g50840.1 |
| Ricechip | LOC_Os05g50840.1 |
| KEGG | osa:4339755 dosa:Os05t0585900-01 |
| Entrez-Gene | 4339755 |