RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g50970.1 View Network Show in Genome Browser |
| Other Names | Os05g0587100 |
| Description | protein phosphatase 2C, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 29244022-29249088 Nucleotide Length: 1476 |
| Protein-coding | LOC_Os05g50970 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g47470 LOC_Os04g30040 LOC_Os03g01850 LOC_Os03g53880 LOC_Os01g66610 LOC_Os03g02680 LOC_Os01g44110 LOC_Os05g06280 LOC_Os05g25450 LOC_Os04g13640 LOC_Os03g61690 More.. |
| Downstream Genes | LOC_Os12g01740 LOC_Os10g05160 LOC_Os10g35450 LOC_Os10g09550 LOC_Os11g01740 LOC_Os07g47950 LOC_Os06g43030 LOC_Os09g15700 LOC_Os09g16950 LOC_Os06g49170 LOC_Os11g14050 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g50970.1 |
| Rice Genome Annotation | LOC_Os05g50970.1 |
| Ricechip | LOC_Os05g50970.1 |
| KEGG | osa:4339763 dosa:Os05t0587100-01 |
| Entrez-Gene | 4339763 |