RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g51130.1 View Network Show in Genome Browser |
| Other Names | Os05g0588900 |
| Description | mitochondrial chaperone BCS1, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 29331744-29333774 Nucleotide Length: 1455 |
| Protein-coding | LOC_Os05g51130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g49000 LOC_Os02g21040 LOC_Os02g47760 LOC_Os02g16670 LOC_Os03g04070 LOC_Os03g57690 LOC_Os03g57680 LOC_Os03g05730 LOC_Os02g21970 LOC_Os01g62040 LOC_Os02g15810 More.. |
| Downstream Genes | LOC_Os07g12890 LOC_Os09g04339 LOC_Os06g12160 LOC_Os06g50050 LOC_Os07g18120 LOC_Os07g08170 LOC_Os10g30580 LOC_Os09g16510 LOC_Os10g04860 LOC_Os07g49150 LOC_Os06g49140 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g51130.1 |
| Rice Genome Annotation | LOC_Os05g51130.1 |
| Ricechip | LOC_Os05g51130.1 |
| KEGG | osa:4339775 dosa:Os05t0588900-01 |
| Entrez-Gene | 4339775 |