RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g51140.1 View Network Show in Genome Browser |
| Other Names | Os05g0589000 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 29336108-29340508 Nucleotide Length: 408 |
| Protein-coding | LOC_Os05g51140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g08370 LOC_Os03g11720 LOC_Os02g57630 LOC_Os01g65450 LOC_Os04g56980 LOC_Os02g42550 LOC_Os03g16110 LOC_Os01g69850 LOC_Os01g36860 LOC_Os02g38340 LOC_Os05g01994 More.. |
| Downstream Genes | LOC_Os07g25420 LOC_Os12g41760 LOC_Os07g47710 LOC_Os08g42020 LOC_Os12g19350 LOC_Os08g33920 LOC_Os07g12200 LOC_Os07g12170 LOC_Os07g05650 LOC_Os12g05090 LOC_Os08g02080 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g51140.1 |
| Rice Genome Annotation | LOC_Os05g51140.1 |
| Ricechip | LOC_Os05g51140.1 |
| KEGG | osa:4339776 dosa:Os05t0589000-01 |
| Entrez-Gene | 4339776 |