RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g51180.1 View Network Show in Genome Browser |
| Other Names | Os05g0589600 |
| Description | hyaluronan/mRNA binding family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 29355973-29359209 Nucleotide Length: 1152 |
| Protein-coding | LOC_Os05g51180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g21530 LOC_Os03g54890 LOC_Os03g17450 LOC_Os05g39050 LOC_Os05g38740 LOC_Os04g49420 LOC_Os03g02780 LOC_Os02g45940 LOC_Os01g61920 LOC_Os03g21080 LOC_Os01g49190 More.. |
| Downstream Genes | LOC_Os08g09350 LOC_Os10g39410 LOC_Os09g38020 LOC_Os09g26340 LOC_Os07g36500 LOC_Os07g10660 LOC_Os07g39780 LOC_Os09g08910 LOC_Os06g37180 LOC_Os08g44380 LOC_Os06g08480 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g51180.1 |
| Rice Genome Annotation | LOC_Os05g51180.1 |
| Ricechip | LOC_Os05g51180.1 |
| KEGG | osa:4339782 dosa:Os05t0589600-01 |
| Entrez-Gene | 4339782 |