RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g51420.6 View Network Show in Genome Browser |
| Other Names | Os05g0591900 |
| Description | hypersensitive-induced response protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 29486727-29492171 Nucleotide Length: 867 |
| Protein-coding | LOC_Os05g51420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g30790 LOC_Os03g62490 LOC_Os02g37000 LOC_Os05g29760 LOC_Os01g34390 |
| Downstream Genes | LOC_Os09g12560 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g51420.6 |
| Rice Genome Annotation | LOC_Os05g51420.6 |
| Ricechip | LOC_Os05g51420.6 |
| KEGG | osa:4339791 dosa:Os05t0591900-03 |
| Entrez-Gene | 4339791 |