RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g51550.1 View Network Show in Genome Browser |
| Other Names | Os05g0593300 |
| Description | DNA binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 29554783-29559880 Nucleotide Length: 1986 |
| Protein-coding | LOC_Os05g51550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g52130 LOC_Os01g09460 LOC_Os03g55150 LOC_Os03g63940 LOC_Os02g58090 LOC_Os02g49190 LOC_Os05g05230 LOC_Os02g39800 LOC_Os01g53450 LOC_Os01g52790 LOC_Os05g09500 More.. |
| Downstream Genes | LOC_Os11g43640 LOC_Os07g40580 LOC_Os12g32240 LOC_Os11g42160 LOC_Os06g38470 LOC_Os07g02210 LOC_Os10g42950 LOC_Os09g02284 LOC_Os07g06980 LOC_Os10g41150 LOC_Os07g01820 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g51550.1 |
| Rice Genome Annotation | LOC_Os05g51550.1 |
| Ricechip | LOC_Os05g51550.1 |
| KEGG | osa:4339802 dosa:Os05t0593300-01 |
| Entrez-Gene | 4339802 |