RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g51640.2 View Network Show in Genome Browser |
| Other Names | Os05g0594800 |
| Description | adhesion regulating molecule family, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 29617739-29622797 Nucleotide Length: 921 |
| Protein-coding | LOC_Os05g51640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g30800 LOC_Os01g16190 LOC_Os02g57630 LOC_Os03g13970 LOC_Os03g08280 LOC_Os02g11050 LOC_Os02g45820 LOC_Os01g36890 LOC_Os02g05340 LOC_Os05g05470 LOC_Os01g36920 More.. |
| Downstream Genes | LOC_Os10g39620 LOC_Os08g12820 LOC_Os06g48640 LOC_Os09g15750 LOC_Os08g42380 LOC_Os06g30060 LOC_Os07g48780 LOC_Os10g30580 LOC_Os06g07630 LOC_Os07g47780 LOC_Os08g09940 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g51640.2 |
| Rice Genome Annotation | LOC_Os05g51640.2 |
| Ricechip | LOC_Os05g51640.2 |
| KEGG | osa:4339809 dosa:Os05t0594800-01 |
| Entrez-Gene | 4339809 |