RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g51680.1 View Network Show in Genome Browser |
| Other Names | Os05g0595200 |
| Description | SCP-like extracellular protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 29634921-29638282 Nucleotide Length: 999 |
| Protein-coding | LOC_Os05g51680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g28450 LOC_Os02g27300 LOC_Os04g55410 |
| Downstream Genes | LOC_Os07g03740 LOC_Os07g03730 LOC_Os07g03710 LOC_Os07g03690 LOC_Os07g03458 LOC_Os07g03368 LOC_Os07g03279 LOC_Os07g03680 LOC_Os07g03377 LOC_Os07g03750 LOC_Os09g36440 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g51680.1 |
| Rice Genome Annotation | LOC_Os05g51680.1 |
| Ricechip | LOC_Os05g51680.1 |
| KEGG | osa:4339813 dosa:Os05t0595200-01 |
| Entrez-Gene | 4339813 |