RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g51710.1 View Network Show in Genome Browser |
| Other Names | Os05g0595500 |
| Description | pleckstrin homology domain-containing protein-related taxo, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 29664030-29667564 Nucleotide Length: 753 |
| Protein-coding | LOC_Os05g51710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g46340 LOC_Os03g49770 LOC_Os01g63800 LOC_Os05g29050 LOC_Os02g50550 LOC_Os03g24180 LOC_Os02g42134 |
| Downstream Genes | LOC_Os12g18770 LOC_Os09g33600 LOC_Os10g33930 LOC_Os10g31770 LOC_Os10g41060 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g51710.1 |
| Rice Genome Annotation | LOC_Os05g51710.1 |
| Ricechip | LOC_Os05g51710.1 |
| KEGG | osa:4339816 dosa:Os05t0595500-01 |
| Entrez-Gene | 4339816 |