RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g01304.2 View Network Show in Genome Browser |
| Other Names | Os06g0102700 |
| Description | spotted leaf 11, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 185692-188137 Nucleotide Length: 1815 |
| Protein-coding | LOC_Os06g01304 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005102 | receptor binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g59494 LOC_Os02g52370 LOC_Os05g28510 LOC_Os03g18350 LOC_Os05g44290 LOC_Os05g11570 LOC_Os03g53140 LOC_Os01g12250 LOC_Os03g19680 LOC_Os04g54840 LOC_Os05g27320 More.. |
| Downstream Genes | LOC_Os09g36550 LOC_Os12g24550 LOC_Os12g38110 LOC_Os10g06700 LOC_Os07g07310 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR166a-5p osa-miR166e-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g01304.2 |
| Rice Genome Annotation | LOC_Os06g01304.2 |
| Ricechip | LOC_Os06g01304.2 |
| KEGG | osa:4339839 dosa:Os06t0102700-01 |
| Entrez-Gene | 4339839 |