RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g01320.1 View Network Show in Genome Browser |
| Other Names | Os06g0102900,Os06g0102800 |
| Description | chromo domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 195018-208583 Nucleotide Length: 6402 |
| Protein-coding | LOC_Os06g01320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0040029 | regulation of gene expression, epigenetic | Biological Process | IEA | |
| GO:0040029 | regulation of gene expression, epigenetic | Biological Process | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g35600 LOC_Os01g01390 LOC_Os03g16369 LOC_Os03g13614 |
| Downstream Genes | LOC_Os09g07360 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR413 |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g01320.1 |
| Rice Genome Annotation | LOC_Os06g01320.1 |
| Ricechip | LOC_Os06g01320.1 |
| KEGG | osa:4339841 osa:4339840 dosa:Os06t0102900-01dosa:Os06t0102800-01 |
| Entrez-Gene | 4339841 |