RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os06g01360.2 View Network Show in Genome Browser |
| Other Names | Os06g0103300 |
| Description | homogentisate 1,2-dioxygenase, putative, expressed |
| Gene Attributes | Chromosome: Chr6 CDS Coordinates (5'-3'): 214967-218294 Nucleotide Length: 1206 |
| Protein-coding | LOC_Os06g01360 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g07160 LOC_Os02g35590 LOC_Os02g10310 LOC_Os03g41080 LOC_Os02g55200 LOC_Os01g01160 LOC_Os05g45370 LOC_Os02g46990 LOC_Os01g01420 LOC_Os02g19150 LOC_Os04g52500 More.. |
| Downstream Genes | LOC_Os12g10720 LOC_Os11g14040 LOC_Os12g10730 LOC_Os06g03720 LOC_Os10g38780 LOC_Os06g45480 LOC_Os07g31300 LOC_Os09g20660 LOC_Os08g31830 LOC_Os06g14620 LOC_Os06g43930 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os06g01360.2 |
| Rice Genome Annotation | LOC_Os06g01360.2 |
| Ricechip | LOC_Os06g01360.2 |
| KEGG | osa:4339844 dosa:Os06t0103300-01 |
| Entrez-Gene | 4339844 |